Open source · Self-hosted · v0.4

Cure your cancer. Today.

Sample your DNA. Compute your cure. cancerstudio designs a personalized mRNA vaccine from the mutations in your tumor — for dogs, cats, and humans.

scroll
three words

Sample. Compute. Cure.

01Sample

Sequence the tumor.

A biopsy plus a matched healthy sample. Two FASTQ files.

02Compute

Find the mutations.

Eight stages compare tumor vs. healthy and design the molecule.

03Cure

Print the vaccine.

Send the design to a manufacturer. A vial arrives ten days later.

how it works

Eight stages. Twelve hours. One molecule.

    Bring two FASTQs.
    We calculate your cure.

    Sequence the tumor and a matched healthy sample at any standard lab. Run cancerstudio on your machine to design the vaccine.

    01
    Sequence
    Tumor + matched normal. Whole-exome or RNA-seq, any provider.
    02
    Calculate
    Run cancerstudio. Eight stages, ≈12 hours on a workstation.
    03
    Manufacture
    One FASTA file to a GMP partner. Vial in ≈10 days.
    What you'll need
    • Inputs. Tumor + matched-normal FASTQs (≥30× coverage).
    • Hardware. 64 GB RAM · 500 GB SSD · 16 cores. Linux, macOS, or WSL.
    • Licenses. Free academic license for NetMHCpan & netMHCIIpan (you bring the keys).
    • Reference. Species reference genome (download script included).
    Open on GitHub Read the docs